Frédéric Marin

Liste des publications

1990-1994:

Gautret, P. & Marin, F., 1990. Composition en acides aminés des phases protéiques solubles et insolubles du squelette calcaire de trois Démosponges actuelles: Ceratoporella nicholsoni  (Hickson), Astrosclera willeyana  Lister etVaceletia crypta  (Vacelet). C. R. Acad. Sci. Paris, 310, Sér. II: 1369-1374.

Dauphin, Y., Marin, F., Gautret, P. & Cuif, J. P., 1990. Discrimination des biominéralisations aragonitiques fibreuses des Spongiaires, Cnidaires et Mollusques par l'indice de substitution des éléments mineurs dans le réseau carbonaté. C. R. Acad. Sci. Paris,  311, Sér. II: 1111-1116.

Marin, F. & Dauphin, Y., 1991. Composition de la phase protéique soluble des coquilles d'oeufs de Dinosaures du Rognacien (Crétacé) du Sud-Est de la France. N. Jb. Geol. Pal. Mh., 4: 243-254.

Cuif, J. P., Gautret, P. & Marin, F., 1991. Correlation between the size of crystals and the molecular weight of organic fractions in the soluble matrices of Mollusc, Coral and Sponge carbonate skeletons. "Mechanisms & Phylogeny of Mineralization in Biological Systems" (S. Suga & H. Nakahara eds.), Springer Verlag, Tokyo: 391-395.

Marin, F. & Dauphin, Y., 1991. Diversité des altérations dans la composition en acides aminés de la phase organique de la nacre des huîtres perlières de Polynésie française (Pinctada margaritifera ) atteintes par l'épizootie. C. R. Acad. Sci. Paris, 312, Sér. III: 483-488.

Cuif, J. P., Denis, A., Gautret, P., Marin, F., Mastandrea, A. & Russo, F., 1992. Recherches sur l'altération diagénétique des biominéralisations carbonatées: évolution de la phase organique intrasquelettique dans les polypiers aragonitiques de Madréporaires du Cénozoïque (Bassin de Paris) et du Trias supérieur (Dolomites et Turquie). C. R. Acad. Sci. Paris,  314, Sér. II: 1097-1102.

Marin, F. & Dauphin, Y., 1992. Malformations de la couche nacrée de l'huître perlière Pinctada margaritifera  (L.) de Polynésie française: rapports entre altérations microstructurales et composition en acides aminés. Ann. Sci. Nat., Zoologie, Paris, 13è série, vol. 13, fasc. 4: 157-168.

Gautret, P. & Marin, F., 1993a. Tendances diagénétiques des structures aragonitiques fibreuses produites par des Spongiaires et des Madréporaires du Trias supérieur de Turquie. C. R. Acad. Sci. Paris, 316, Sér. II: 1319-1325.

Gautret, P. & Marin, F., 1993b. Evaluation of diagenesis in Scleractinian Corals and calcified Demosponges by substitution index measurement and intraskeletal organic matrix analyses. VI Int. Symp. on Fossil Cnidaria, Münster, 9-14 Sept 1991. Cour. Forsch. Inst. Senckenberg, 164: 317-327.

Marin, F. & Gautret, P., 1994. Les teneurs en acides aminés acides des matrices organiques solubles associées aux squelettes calcaires des Démosponges et des Cnidaires: une implication possible dans leur évolution diagénétique. Bull. Soc. Géol. Fr., 165 (1): 77-84.

Marin, F., Muyzer, G. & Dauphin, Y., 1994. Caractérisation électrophorétique et immunologique des matrices organiques solubles de deux Bivalves Ptériomorphes actuels, Pinna nobilis  L. et Pinctada margaritifera  (L.). C. R. Acad. Sci. Paris, 318, Sér. II: 1653-1659.


1995-2003:

Reitner, J., Gautret, P., Marin, F. & Neuweiler, F., 1995. Automicrites in a modern microbialite. Formation model via organic matrices (Lizard Island, Great Barrier Reef, Australia). Bull. Inst. Océanogr. Monaco, n° spécial 14 (2): 237-263.

Dauphin, Y. & Marin, F., 1995. The compositional analysis of recent cephalopod shell carbohydrates by Fourier transform infrared spectrometry and high performance anion exchange- pulsed amperometric detection. Experientia, 51(3): 278-283, (revue rebaptisée après 1997 Cellular and Molecular Life Science). DOI: 10.1007/BF01931112.

Larvor, H., Cuif, J. P., Dauphin, Y., Denis, A., Devauchelle, N., Gautret, P. & Marin, F., 1996. Development of a brown internal coloration in the scallop shell (Pecten maximus).  Study of microstructural characteristics and analyses of crystal organic matrices. Bull. Inst. Océanogr. Monaco, n° spécial 14 (4): 171-182.

Gautret, P., Reitner, J. & Marin, F., 1996. Mineralization events during growth of the coralline sponges Acanthochaetetes and Vaceletia. Bull. Inst. Océanogr. Monaco, n° spécial 14 (4): 325-334.

Cuif, J. P., Dauphin, Y., Denis, A., Gautret, P. & Marin, F., 1996.  The organo-mineral structure of coral skeletons: a potential source of new criteria for scleractinian taxonomy. Bull. Inst. Océanogr. Monaco, n° spécial 14 (4): 359-367.

Marin, F., Smith, M., Isa, Y., Muyzer, G. & Westbroek, P., 1996. Skeletal matrices, muci and the origin of Invertebrate calcification. Proc. natl. Acad. Sci. USA, 93: 1554-1559. DOI: 10.1073/pnas.93.4.1554.

Westbroek, P., and Marin, F., 1996. On the origin of metazoan calcification. Origins Life Evol. Biospheres, 26 (3-5): 502.

Westbroek, P. & Marin, F., 1998. A marriage of bone and nacre. Nature, 392: 861-862. DOI: 10.1038/31798.

Marin, F., Gillibert, M., Wesbroek, P., Muyzer, G. & Dauphin, Y., 1999. Evolution: disjunct degeneration of immunological determinants. Geol. Mijnbouw, 78 (2): 135-139. DOI: 10.1023/A:1003882928828.

Marin, F., Corstjens, P., De Gaulejac, B., De Vrind-De Jong, E. & Westbroek, P., 2000. Mucins and molluscan calcification: molecular characterization of mucoperlin, a novel acidic mucin-like protein of the nacreous shell-layer of the fan mussel Pinna nobilis (Bivalvia, Pteriomorphia).  J. Biol. Chem., 275 (27): 20667-20675. DOI: 10.1074/jbc.M003006200.

Bédouet, L., Schuller, J., Marin, F., Milet, C., Lopez, E., and Giraud, M., 2001. Soluble proteins of the nacre of the giant oyster Pinctada maxima and of the abalone Haliotis tuberculata: extraction and partial analysis of nacre proteins. Comp. Biochem. Physiol., B, 128 (3): 389-400. DOI: 10.1016/S1096-4959(00)00337-7.

Marin, F., Pereira, L., and Westbroek, P, 2001. Large-scale purification of molluscan shell matrix. Prot. Expres. Purif., 23: 175-179. DOI: 10.1006/prep.2001.1487.

Du, C., Tichelaar, F. D., Marin, F., Hofland, I., Cui, F. Z., De Groot, K., and Layrolle, P., 2002. Self-assembly apatite and composites: a model system relevant to biomineralization and biomimetic synthesis. In « Biomimetic Composites for Bone Substitution », C. Du PhD Thesis (thèse publiée), Leiden University, Chapter 8: 111-128.

Hecker, A., Testenière, O., Marin, F., and Luquet, G., 2003. Phosphorylation of serine residues is fundamental for the calcium-binding ability of Orchestin, a soluble matrix protein from crustacean calcium storage structures. FEBS Letters, 535: 49-54. DOI: 10.1016/S0014-5793(02)03856-5.

Westbroek, P., and Marin, F., 2003. The geologic history of calcification. In “ Biomineralization : Formation, Diversity, Evolution and Application ”. Proceedings of the 8th International Symposium on Biomineralization (Kobayashi I. and Ozawa H. eds.), Tokai University Press, Kanagawa:  3-7.

Marin, F., Layrolle, P.,  De Groot, K., and Westbroek, P., 2003. The origin of metazoan skeleton. In “ Biomineralization : Formation, Diversity, Evolution and Application ”. Proceedings of the 8th International Symposium on Biomineralization (Kobayashi I. and Ozawa H. eds.), Tokai University Press,Kanagawa:  50-53.

Pereira-Mouries, L., Almeida, M. J., Marin, F., Gay, M., Milet, C., and Lopez, E, 2003. Soluble proteins of the nacre from the giant oyster Pinctada maxima, with highly hydrophobic amino acids. In “ Biomineralization : Formation, Diversity, Evolution and Application ”. Proceedings of the 8th International Symposium on Biomineralization (Kobayashi I. and Ozawa H. eds.), Tokai University Press,Kanagawa:  145-148.

Marin, F., Westbroek, P ., and De Groot, K, 2003. Screening molluscan cDNA expression libraries with anti-shell matrix antibodies. Prot. Expres. Purif., 30 (2): 246-252. DOI: 10.1016/S1046-55928(03)00105-0.

Marin, F., 2003. Molluscan shell matrix characterization by preparative SDS-PAGE. The Scientific World Journal, 3: 342-347. DOI: 10.1100/tsw.2003.30.

Marin, F., Westbroek, P., and de Groot, K., 2003. The proteinaceous constituents of the shell of Pinna nobilis L. In « First International Meeting on the Mediterranean Fan-Shell Pinna nobilis 10-12 Oct. 2002, Ile des Embiez» Mémoires de l’Institut Océanographique Paul Ricard : 77- 90.


2004-2016:

Marin, F., Luquet, G., 2004. Molluscan shell proteins. C. R. Palevol., 3 (6-7): 469-492. DOI: 10.1016/j.crpv.2004.07.009.

Luquet, G., Marin, F., 2004. Biomineralization in Crustaceans: storage strategies. C. R. Palevol., 3 (6-7): 515-534. DOI: 10.1016/j.crpv.2004.07.015.

Marin, F., Luquet, G., 2005. Molluscan biomineralization: the proteinaceous shell constituents of Pinna nobilis. Material Science & Engineering C: Biomimetic and Supramolecular Systems, 25: 105-111. DOI: 10.1016/j.msec.2005.01.003

Luquet, G., Hecker, A., and Marin, F., 2005. Orchestin, a key calcium-binding phosphoprotein in the cyclic elaboration of two different ACC storage structures by the crustacean Orchestia cavimana. Proceedings of the 8th ICCBMT 2004, Banff, Alberta, Canada: 111-114. 

Marin, F., Amons, R., Guichard, N., Stigter, M., Hecker, A., Luquet, G., Layrolle, P., Alcaraz, G., Riondet, C. and Westbroek, P., 2005. Caspartin and calprismin, two proteins of the shell calcitic prisms of the Mediterranean fan mussel Pinna nobilis. J. Biol. Chem., 280 (40): 33895-33908. DOI: 10.1074/jbc.M506526200.

Pokroy, B., Fitch, A. N., Marin, F., Kapon, M., Adir, N. and Zolotoyabko, E., 2006. Anisotropic lattice distorsions in biogenic calcite induced by intra-crystalline organic molecules. J. Struct. Biol., 155 (1): 96-103. DOI: 10.1016/j.jsb.2006.03.008.

Marin, F., Pokroy, B., Luquet, G., Layrolle, P., De Groot, K., 2007. Protein mapping of calcium carbonate biominerals by immunogold. Biomaterials, 28: 2368-2377. DOI: 10.1016/j.biomaterials.2007.01.029.

Pokroy, B., Kapon, M., Marin, F., Adir, N., and Zolotoyabko, E., 2007. Protein-induced, previously unidentified twin form of calcite. Proc. Natl. Acad. Sci. USA, 104 (18): 7337-7341. DOI: 10.1073/pnas.0608584104.

Marie, B., Luquet, G., Pais De Barros, J. P., Guichard, N., Morel, S., Alcaraz, G., Bollache, L. and Marin, F., 2007. The shell matrix of the freshwater mussel Unio pictorum (Paleoheterodonta, Unionoida). Involvement of acidic polysaccharides from glycoproteins in nacre mineralization. FEBS Journal, 274 (11) : 2933-2945. DOI: 10.1111/j.1742-4658.2007.05825.x.

Marin, F., Luquet, G., 2007. Unusually acidic proteins in biomineralization, In “Handbook of Biomineralization, Vol 1: the Biology of Biominerals Structure Formation”, E. Baeuerlein ed., Wiley-VCH Weinheim, Chapter 16: 273-290.

Gaspard, D., Marie, B., Guichard, N., Luquet, G. and Marin, F., 2007. Biochemical characteristics of the shell soluble organic matrix of some recent Rhynchonelliformea (Brachiopoda). In: Biomineralization, from Paleontology to Materials Science, (Arias J.L., Fernandez M.S., eds), Proceedings of the 9th International Symposium on Biomineralization, Editorial Universitaria, Santiago de Chile: 193-203.

Marie, B., Guichard, N., Pais De Barros, J. P., Luquet, G., and Marin, F., 2007. Calcification in the shell of the freshwater bivalve Unio pictorum. In: Biomineralization, from Paleontology to Materials Science, (Arias J.L., Fernandez M.S., eds), Proceedings of the 9th International Symposium on Biomineralization, Editorial Universitaria, Santiago de Chile: 273-280.

Marin, F., Morin, V., Knap, F., Guichard, N., Marie, B., Luquet, L., Westbroek, P., and Medakovic, D., 2007. Caspartin: Thermal Stability and Occurrence in Mollusk Calcified Tissues. In: Biomineralization, from Paleontology to Materials Science, (Arias J.L., Fernandez M.S., eds), Proceedings of the 9th International Symposium on Biomineralization, Editorial Universitaria, Santiago de Chile: 281-288.

Luquet, G., Fernandez, M. S., Navarrette, M. J., Arias, J. L., Guichard, N., Marie, B., and Marin, F., 2007. Biochemical characterization of the soluble organic matrix of gastroliths from decapods. In: Biomineralization, from Paleontology to Materials Science, (Arias J.L., Fernandez M.S., eds), Proceedings of the 9th International Symposium on Biomineralization, Editorial Universitaria, Santiago de Chile: 319-328.

Gaspard, D., Marin, F., Guichard, N., Morel, S., Alcaraz, G. and Luquet, G., 2008 (for 2007). Shell matrices from Recent rhynchonelliform brachiopods: microstructures and glycosylation studies, In « Brachiopod Research into the Third Millennium – Sir Alwyn Williams Memorial Issue », Trans. R. Soc. Edinburgh (Earth & Environ. Sci.), 98: 415-424. DOI: 10.1017/S1755691007078401.

Gaspard, D., Marie, B., Marin, F., and Luquet, G., 2008. Preliminary analysis of soluble matrix in some recent Terebratulid Brachiopoda. Fossils & Strata, 54 : 269-275.

Marin, F., Luquet, G., Marie, B. and Medakovic, D., 2008. Molluscan shell proteins : primary structure, origin and evolution. Curr. Top. Dev. Biol., 80: 209-276. DOI: 10.1016/S0070-2153(07)80006-8.

Fleury, C., Marin, F., Marie, B., Luquet, G., Thomas, J., Josse, C., Serpentini, A., and Lebel, J. M., 2008. Shell repair process in the green ormer Haliotis tuberculata: a histological and microstructural study. Tissue and Cell, 40: 207-218. DOI: 10.1016/j.tice.2007.12.002.

Marie, B., Luquet G., Bédouet, L., Milet C., Guichard, N., Medakovic, D., and Marin, F., 2008. Nacre calcification in the freshwater mussel Unio pictorum: carbonic anhydrase activity and purification of a 95-kDa calcium-binding glycoprotein. ChemBiochem, 9 (15): 2515-2523. DOI: 10.1002/cbic.200800159.

Weiss, I. M., and Marin, F., 2008. The role of enzymes in biomineralization processes. Met. Ions Life Sci., 4 ("Biomineralization. From Nature to Application", A. Sigel, H. Sigel and R. K. O. Sigel eds.), Wiley & Sons, Chichester, UK: 71-126.

Marie, B., Marin, F., Marie, A., Bédouet, L., Dubost  L., Alcaraz  G., Milet C. and Luquet G., 2009. Evolution of nacre: biochemistry and ‘shellomics’ of the shell organic matrix of the cephalopod Nautilus macromphalus. ChemBiochem, 10: 1495-1510. DOI: 10.1002/cbic.200900009.

Marie, B., Le Roy, N., Marie, A., Dubost, L., Milet, C., Bédouet, L., Becchi, M., Zanella-Cléon, I., Jackson, D., Degnan, B., Luquet, G., and Marin, F., 2009. Nacre evolution: a proteomic approach. In Structure-Property Relationships in Biomineralized and Biomimetic Composites, edited by D. Kisalius, L. Estroff, W. Landis, P. Zavattieri, H. S. Gupta, Warrendale, PA. Mater. Res. Soc. Symp. Proc., vol. 1187: 3-8.

Luquet, G., Le Roy, N., Zanella-Cléon, I., Becchi, M., Bucarey, S., Fernandez, M. S., Arias, J. L., Guichard, N., Marie, B., and Marin, F., 2009. Characterization of Crustacyanin-A2 subunit as a component of the organic matrix of gastroliths from the crayfish Cherax quadricarinatus. In Structure-Property Relationships in Biomineralized and Biomimetic Composites, edited by D. Kisalius, L. Estroff, W. Landis, P. Zavattieri, H. S. Gupta, Warrendale, PA. Mater. Res. Soc. Symp. Proc., vol. 1187: 69-75.

Trinkler, N., Marin, F., Guichard, N., Labonne, M., Bardeau, J. F., and Paillard, C., 2009. Shell repair in the clam Ruditapes philippinarum, affected by the Brown Ring Disease (BRD): a biochemical and serological study. In Structure-Property Relationships in Biomineralized and Biomimetic Composites, edited by D. Kisalius, L. Estroff, W. Landis, P. Zavattieri, H. S. Gupta, Warrendale, PA. Mater. Res. Soc. Symp. Proc., vol. 1187: 89-94.

Trinkler, N., Labonne, M., Marin, F., Jolivet, A., Bohn, M., Poulain, C., Bardeau, J. F., and Paillard, C., 2010. Clam shell repair from the Brown Ring Disease: a study of the organic matrix using Confocal Raman micro-spectrometry and WDS microprobe. Anal. Bioanal. Chem., 396 (2): 555-567. DOI/ 10.1007/s00216-009-3114-0.

Zolotoyabko, E., Caspi, E. N., Fieramosca, J. S., Von Dreele, R. B., Marin, F., Mor, G., Politi, Y., Addadi, L., and Weiner, S., 2010. Differences between bond lengths in biogenic and geological calcite. Crystal Growth & Design, 10 (3): 1207-1214. DOI: 10.1021/cg901195t.

Marie, B., Le Roy, N., Luquet, G., Zanella-Cléon, I., Becchi, M., and Marin, F., 2010. Proteomic analysis of the acid-soluble nacre matrix of the bivalve Unio pictorum: detection of novel carbonic anhydrase and putative protease inhibitor proteins. ChemBioChem, 11(15): 2138-2147. DOI: 10.1002/cbic.201000276.

Marie, B., Marie, A., Jackson, D. J., Dubost, L., Degnan, B. M., Milet, C. and Marin, F., 2010. Proteomic analysis of the organic matrix of the abalone Haliotis asinina calcified shell. Proteome Sci., 8: article number 54. DOI: 10.1186/1477-5956-8-54.

Trinkler, N., Guichard, N., Labonne, M., Plasseraud, L.,Paillard, C., and Marin, F., 2011. Variability of shell repair in the Manila clam Ruditapes philippinarum affected by the Brown Ring Disease : amicrostructural and biochemical study. J. Invertebr. Pathol., 106 (3) : 407-417. DOI: 10.1016/j.jip.2010.12.011.

Trinkler, N., Bardeau, J. F., Marin, F., Labonne, M., Jolivet, A., Crassous, P. and Paillard, C., 2011. The mineral phase in the shell repair of the Manila clam Ruditapes philippinarum affected by the Brown Ring Disease : a Raman micro-spectrometry, SEM and cellular study. Diseases Aquat. Organ., 93 (2) : 149-162. DOI: 10.3354/dao02288.

Marie, B., Trinkler, N., Zanella-Cléon, I., Becchi, M., Guichard, N., Paillard, C. and Marin, F., 2011. Proteomic identification of novel proteins from the calcifying shell matrix of the Manila clam Venerupis philippinarum. Mar. Biotechnol., 13 (5): 955-962. DOI 10.1007/s10126-010-9357-0.

Marie, B., Zanella-Cléon, I., Corneillat, M., Becchi, M., Alcaraz, G., Plasseraud, L., Luquet, G., and Marin, F., 2011. Nautilin-63, a novel acidic glycoprotein from the shell nacre of Nautilus macromphalus. FEBS J., 278 (12) : 2117-2130. DOI :10.1111/j.1742-4658.2011.08129.x.

Montagnani, C., Marie, B., Marin, F., Belliard, C., Riquet, F., Tayale, A., Zanella-Cléon, I., Fleury, E., Gueguen, Y., Piquemal, D., and Cochennec-Loreau, N., 2011. Pmarg-pearlin is a matrix protein involved in nacre framework formation in the pearl oyster Pinctada margaritifera. ChemBioChem, 12 (13): 2033-2043. DOI: 10.1002/cbic.201100216.

Marie, B., Le Roy, N., Zanella-Cléon, I., Becchi, M. and Marin, F., 2011. Molecular evolution of mollusc shell proteins: Insights from proteomic analysis of the edible mussel Mytilus. J. Mol. Evol., 72 (5-6): 531-546. DOI: 10.1007/s00239-011-9451-6.

Marie, B., Zanella-Cléon, I., Guichard, N., Becchi, M., and Marin, F., 2011. Novel proteins from the calcifying shell matrix of the Pacific oyster Crassostrea gigas. Mar. Biotechnol., 13: 1159-1168. DOI 10.1007/s10126-011-9379-2.

Marin, F., Narayanappa, P., and Motreuil, S. 2011. Acidic shell proteins of the Mediterranean fan mussel Pinna nobilis. In: “Molecular Biomineralization: Aquatic Organisms Forming Extraordinary Materials” (W. E. G. Müller, ed.). Progress in Molecular and Subcellular Biology 52: 353-395. DOI: 10.1007/978-3-642-21230-7_13.

Marie, B., Joubert, C., Belliard, C., Tayale, A., Zanella-Cléon, I., Marin, F., Gueguen, Y., and Montagnani, C., 2012. Characterization of MRNP34, a novel methionine-rich nacre protein from the pearl oysters. Amino acids, 42 (5) : 2009-2017. DOI 10.1007/s00726-011-0932-0.

Marin, F., Le Roy, N., and Marie, B., 2012. The formation and mineralization of mollusk shell. Front. Biosci. (Schol. Ed.), 4: 1099-1125.

Bédouet, L., Marie, A., Berland, S., Marie, B., Auzoux-Bordenave, S., Marin, F., and Milet, C., 2012. Proteomic strategy for identifying mollusc shell proteins using mild chemical degradation and trypsin digestion of insoluble organic shell matrix: a pilot study on Haliotis tuberculata. Mar. Biotechnol., 14(4): 446-458. DOI 10.1007/s10126-011-9425-0. 

Pavat, C., Zanella-Cléon, I., Becchi, M., Medakovic, D., Luquet, G., Guichard, N., Alcaraz, G., Dommergues, J. L., Serpentini, A., Lebel, J. M., and Marin, F., 2012. The shell matrix of the pulmonate land snail Helix aspersa maxima. Comp. Biochem. Physiol. B (Biochemistry and Molecular Biology), 161 (4): 303-314. DOI:10.1016/j.cbpb.2011.12.003.

Le Roy, N., Marie, B., Gaume, B., Guichard, N., Sire, J. Y., Delgado, S., Zanella-Cléon, I., Becchi, M., Auzoux-Bordenave, S. and Marin, F., 2012. Identification of two carbonic anhydrases in the mantle of the European abalone Haliotis tuberculata (Gastropoda, Haliotidae): phylogenetic implications. J. Exp. Zool. B (Molecular & Developmental Evolution), 318 (5): 353-367. DOI: 10.1002/jez.b.22452.

Ramos-Silva, P., Benhamada, S., Le Roy, N., Marie, B., Guichard, N., Zanella-Cléon, I., Plasseraud, L., Corneillat, M., Alcaraz, G., Kaandorp, J., and Marin, F., 2012. Novel molluskan biomineralization proteins retrieved from proteomics : a case study with Upsalin. ChemBioChem 13 (7) : 1067-1078. DOI : 10.1002/cbic.201100708.

Wolf, S. E., Lieberwirth, I., Natalio, F., Bardeau, J. F., Delorme, N., Emmerling, F., Barrea, R., Kappl, M., and Marin, F., 2012. Merging models of biomineralization with concepts of nonclassical crystallization : is a liquid amorphous precursor involved in the formation of the prismatic layer of the Mediterranean fan mussel Pinna nobilis ? Faraday Discussions, 159 : 433-448. DOI: 10.1039/c2fd20045g.

Marie, B., Joubert, C., Tayalé, A., Zanella-Cléon, I., Belliard, C., Piquemal, D., Cochennec-Laureau, N., Marin, F., Gueguen, Y., and Montagnani, C. 2012. Different secretory repertoires control the biomineralization processes of prisms and nacre deposition of the pearl oyster shell. Proc. Natl. Acad. Sci. USA, 109 (51): 20986-20991. DOI: 10.1073/pnas.1210552109.

Marie, B., Jackson, D. J., Ramos-Silva, P., Zanella-Cléon, I., Guichard, N., and Marin, F., 2013. The shell-forming proteome of Lottia gigantea reveals both deep conservations and lineage-specific novelties. FEBS J., 280 (1): 214-232. DOI: 10.1111/febs.12062.

Lemloh, M. L., Marin, F., Herbst, F., Plasseraud, L., Schweikert, M., Baier, J., Bill, J., and Brümmer, F., 2013. Genesis of amorphous calcium containing alveolar plates in the ciliate Coleps hirtus (Ciliophora, Prostomatea). J. Struct. Biol., 181 (2) : 155-161. DOI : 10.1016/j.jsb.2012.12.001.

Ramos-Silva, P., Marin, F., Kaandorp, J., and Marie, B., 2013. Biomineralization toolkit : the importance of sample cleaning prior to the characterization of biomineral proteomes. Proc. Natl. Acad. Sci. USA, 110 (24) : E2144-E2146. DOI: 10.1073/pnas.1303657110.

Ramos-Silva, P., Kaandorp, J., Huisman, L., Marie, B., Zanella-Cléon, I., Guichard, N., Miller, D. J., and Marin, F., 2013. The skeletal proteome of the coral Acropora millepora: the evolution of calcification by co-option and domain shuffling. Mol. Biol. Evol., 30(9): 2099-2112. DOI: 10.1093/molbev/mst109.

Marie, A., Ramos-Silva, P., Marin, F., Marie, B., 2013. Proteomics of CaCO3 biomineral-associated proteins: how to properly aboard their analysis. Proteomics, 13 (21): 3109-3116. DOI: 10.1002/pmic.201300162.

Marin, F., Marie, B., Benhamada, S., Silva, P., Le Roy, N., Guichard, N., Wolf, S., Montagnani, C., Joubert, C., Piquemal, D., Saulnier, D., and Gueguen, Y., 2013. ‘Shellome’: Proteins involved in mollusk shell biomineralization – diversity, functions. In ‘Recent Advances in Pearl Research - Proceedings of the International Symposium on Pearl Research 2011’ - S. Watabe, K. Maeyama and H. Nagasawa eds., Terrapub, Tokyo: 149-166.

Gueguen, Y., Montagnani, C., Joubert, C., Marie, B., Belliard, C., Tayalé, A., Fievet, J., Levy, P., Piquemal, D., Marin, F., Le Moullac, G., Ky; C. H., Garen, P., Lo, C., and Saulnier, D., 2013. Characterization of molecular processes involved in the pearl formation in Pinctada margaritifera for the sustainable development of pearl farming industry in French Polynesia. In ‘Recent Advances in Pearl Research - Proceedings of the International Symposium on Pearl Research 2011’ - S. Watabe, K. Maeyama and H. Nagasawa eds., Terrapub, Tokyo: 183-193.

Osuna-Mascaro, A., Cruz-Bustos, T., Benhamada, S., Guichard, N., Marie, B., Plasseraud, L., Corneillat, M., Alcaraz, G., Checa, A., and Marin, F. 2014. The shell organic matrix of the crossed lamellar queen conch shell (Strombus gigas). Comp. Biochem. Physiol. B (Biochemistry & Molecular Biology) 168: 76-85. DOI: 10.1016/j.cbpb.2013.11.009.

Marin, F., Le Roy, N., Marie, B., Ramos-Silva, P., Wolf, S., Benhamada, S., Guichard, N., and Immel, F., 2014. Synthesis of calcium carbonate biological materials: how many proteins are needed? Key Engineering Materials (KEM), 614: 52-61. DOI:10.4028/www.scientific.net/KEM.614.52.

Ramos-Silva, P., Kaandorp, J., Herbst, F., Plasseraud, L., Alcaraz, G., Stern C., Corneillat, M., Guichard, N., Durlet, C., Luquet, G., and Marin, F., 2014. The skeleton of the staghorn coral Acropora millepora: molecular and structural characterization. PlosOne, 9 (6): e97454. DOI:10.1371/journal.pone.0097454. 

Marin, F., Le Roy, N., Marie, B., Ramos-Silva, P., Bundeleva, I., Guichard, N., and Immel, F., 2014. Metazoan calcium carbonate biomineralizations: macroevolutionary trends - challenges for the coming decade. Bull. Soc. Géol. France, 185 (4): 217-232.

Latire, T., Legendre, F., Bigot, N., Carduner, L., Kellouche, S., Bouyoucef, M., Carreiras, F., Marin, F., Lebel, J. M., Galéra, P., and Serpentini, A., 2014. Shell extracts from the marine bivalve Pecten maximus regulate the synthesis of extracellular matrix in primary cultured human skin fibroblasts. PlosOne, 9 (6): e99931. DOI:10.1371/journal.pone.0099931.

Le Roy, N., Jackson, D. J., Marie, B., Ramos-Silva, P., and Marin, F., 2014. The evolution of metazoan alpha-carbonic anhydrases and their roles in CaCO3 biomineralization. Frontiers in Zoology, 11: 75 (16 pages). DOI: 10.1186/s12983-014-0075-8.

Kanold, J. M., Lemloh, M. L., Schwendt, P., Burghard, Z., Baier, J., Herbst, F., Bill, J., Marin, F., and Brümmer, F., 2015. In vivo enrichment of magnesium ions modifies sea urchin spicule properties. Bioinspired, Biomimetic and Nanobiomaterials, 4 (2) : 111-120. DOI : http://dx.doi.org/10.1680/bbn.14.00023.

Kanold, J. M., Immel, F., Broussard, C., Guichard, N., Plasseraud, L., Corneillat, M., Alcaraz, G., Brümmer, F., and Marin, F., 2015. The test skeletal matrix of the black sea urchin Arbacia lixula. Comp. Biochem. Physiol. D (Genomics & Proteomics), 13: 24-34. DOI: 10.1016/j.cbd.2014.12.002.

Kanold, J. M., Guichard, N., Immel, F., Plasseraud, L., Corneillat, M., Alcaraz, G., Brümmer, F., and Marin, F., 2015. Spine and test skeletal matrices of the Mediterranean sea urchin Arbacia lixula – a comparative characterization of their sugar signature. FEBS J., 282 (10) : 1891-1905. DOI : 10.1111/febs.13242.

Osuna-Mascaro, A., Cruz-Bustos, T., Marin, F., and Checa, A. G., 2015. Ultrastructure of the interlamellar membranes of the nacre of the bivalve Pteria hirundo, determined by immunolabelling. Plos One, 10 (4): e0122934. DOI: 10.1371/journal.pone.0122934.

Immel, F., Gaspard, D., Marie, A., Guichard, N., Cusack, M., and Marin, F., 2015. Shell proteome of rhynchonelliform brachiopods. J. Struct. Biol., 190 (3): 360-366. DOI: 10.1016/j.jsb.2015.04.001.

Frølich, S. Sørensen, H. O., Hakim, S. S., Marin, F., Stipp, S. L. S. and Birkedal, H., 2015. Smaller calcite lattice deformation caused by occluded organic material in coccoliths than in mollusk shell. Crystal Growth and Design, 15 (6) : 2761-2767. DOI : 10.1021/acs.cgd.5b00118.

Marin, F., Siller, L., Brummer, F., Lesci, I. G., Checa, A., Furtos, G., 2015. Preface. Key Engineering Materials, 672 : v-vi.

Marin, F., Medakovic, D., and Brummer, F., 2015. Biomineralix (COST Action TD0903), 2009-2014 : an overview. Key Engineering Materials, 672 : 1-18. DOI: 10.4028/www.scientific.net/KEM.672.1.

Bundeleva, I. A., Shirokova, L. S., Kompantseva, E. I., Bénézeth, P., Ménez, B., Marin, F., and Pokrovsky, O. S., 2015. Experimental modeling of bacterially-induced Ca carbonate precipitation : new insights on possible mechanisms. Key Engineering Materials, 672 : 21-39. DOI: 10.4028/www.scientific.net/KEM.672.21.

Wolf, S. E., Böhm, C., Harris, J., Hajir, M., Mondeshki, M., and Marin, F., 2015. Single nanogranules preserve intracrystalline amorphicity in biominerals. Key Engineering Materials, 672 : 47-59. DOI: 10.4028/www.scientific.net/KEM.672.47.

Le Roy, N., Jackson, D. J., Marie, B., Ramos-Silva, P., and Marin, F., 2015. Carbonic anhydrase and metazoan biocalcification : a focus on molluscs. Key Engineering Materials, 672 : 151-157. DOI: 10.4028/www.scientific.net/KEM.672.151.

Marie, B., Arivalagan, J., Dubost, L., Berland, S., Marie, A., and Marin, F., 2015. Unveiling the evolution of bivalve nacre proteins by shell proteomics of Unionoidae. Key Engineering Materials, 672 : 158-167. DOI: 10.4028/www.scientific.net/KEM.672.158.

Kanold, J. M., Immel, F., Marie, A., Plasseraud, L., Alcaraz, G., Brummer, F., and Marin, F., 2015. Characterization of the teeth skeletal matrix from Arbacia lixula. Key Engineering Materials, 672, 168-182. DOI: 10.4028/www.scientific.net/KEM.672.168.

Ramos-Silva, P., and Marin, F., 2015. Proteins as functional units of biocalcification – an overview. Key Engineering Materials, 672, 183-190. DOI: 10.4028/www.scientific.net/KEM.672.183.

Immel, F., and Marin, F., 2015. Data mining approaches to identify biomineralization related sequences. Key Engineering Materials, 672 : 191-214. DOI: 10.4028/www.scientific.net/KEM.672.191.

Marin, F., Immel, F., Trinkler, N., and Gaspard, D., 2015. Staining SDS-PAGE gels of skeletal matrices after Western-blot: a way to improve their sharpness. Key Engineering Materials, 672 : 215-221. DOI: 10.4028/www.scientific.net/KEM.672.215.

Parker, A., Immel, F., Guichard, N., Broussard, C. and Marin, F., 2015. Thermal stability of nacre proteins of the Polynesian pearl oyster: a proteomic study. Key Engineering Materials, 672 : 222-233. DOI: 10.4028/www.scientific.net/KEM.672.222.

Osuna-Mascaro, A., Cruz-Bustos, T., Marie, B., Checa, A., and Marin, F., 2015. Heavy metals in mollusc shells : a quick method for their detection. Key Engineering Materials, 672 : 340-346. DOI: 10.4028/www.scientific.net/KEM.672.340.

Hovden, R., Wolf, S. E., Holtz, M. E., Marin, F., Muller, D. A., Estroff, L., 2015. A. Nanoscale assembly processes revealed in the nacroprismatic transition zone of Pinna nobilis mollusc shells. Nature communications, 6 : 10097. DOI: 10.1038/ncomms100097.

Karakostis, K., Zanella-Cléon, I., Immel F., Guichard, N., Dru, P., Lepage, T., Plasseraud, L., Matranga, V., and Marin, F., 2016. A minimal molecular toolkit for mineral deposition? Biochemistry and proteomics of the test matrix of adult specimens of the sea urchin Paracentrotus lividus. J. Proteomics, 136 : 133-144. DOI: 10.1016/j.jprot.2016.01.001.

Böhm, C. F., Demmert, B., Harris, J., Fey, T., Marin, F., and Wolf, S., 2016. Structural commonalities and deviations in the hierarchical organization of crossed-lamellar shells : a case study on the shell of the bivalve Glycymeris glycymeris. J. Mater. Res., 31 (5) : 536-546. DOI: 10.1557/jmr.2016.46.

Immel, F., Broussard, C., Catherinet, B., Plasseraud, L., Alcaraz, G., Bundeleva, I., and Marin, F., 2016. The shell of the invasive bivalve species Dreissena polymorpha: biochemical, elemental and textural investigations. Plos One, 11 (5): e0154264. DOI: 10.1371/journal.pone.0154264.

Marin, F., Bundeleva, I., Takeuchi, T., Immel, F., and Medakovic, D., 2016. Organic matrices in metazoan calcium carbonate skeletons: composition, functions, evolution. J. Struct. Biol., 196: 98-106. DOI: 10.1016/j.jsb.2016.04.006.

Mouchi, V., Lartaud, F., Guichard, N., Immel, F., De Rafélis, M., Broussard, C., Crowley, Q. G., and Marin, F., 2016. Chalky versus foliated: a discriminant immunogold labelling of shell microstructures in the edible oyster Crassostrea gigas. Mar. Biol. 163:256. DOI 10.1007/s00227-016-3040-6.

 

Mémoire, ouvrage:

Marin, F., 2009. Biominéralisation de la coquille des mollusques : origine, évolution, formation. Mémoire d’Habilitation à Diriger des Recherches, Université de Bourgogne, 243 pages.

Marin, F., Brümmer, F., Checa, A., Furtos, G., Lesci, I. G., & Siller, L., eds. 2015. Biomineralization: from Fundamentals to Biomaterials and Environmental Issues. Trans Tech Publications, Pfaffikon, Switzerland, 350pp.

 

Divers: prospectives du CNRS

Marin, F., 2013. Biominéralisation en domaine marin: 110-113 In “Prospective Mer de l’INEE,” (F. Gaill, B. David coord.), chapitre ‘Diversité et dynamique des écosystèmes marins’ (VI). Cahiers Prospectives du CNRS, n° 4, mai 2013, 175p.

Aloisi, G., Escarguel; G., Marin, F., Servais, T., 2016. Comité Thématique 4 “Terre Vivante”: 58-65. In “Prospective de l’Institut National des Sciences de l’Univers, Terre Solide 2016-2020” (M. Chaussidon, C. Grappin coord.), 138p.

 

Vulgarisation:

Marin, F., 2005. La Terre, une histoire de 4,6 milliards d’années. La Feuille (Bulletin de la Maison de la Nature et du Paysage de Côte d’Or), 17 : 16-20.

Marin, F., 2011. Biominéralisation: des protéines acides peuvent lier le vivant et le minéral. La Recherche, N° 450 (Mars 2011). Article de 513 mots, dans la rubrique “Question à l’expert”, domaine “matière”: p 15.

Marin, F., 2016. Il y a nacre et nacre. Court article de 213 mots dans la rubrique ‘Courrier’ du numéro 513-514 de La Recherche (Juillet-Août 2016): page 17.